USER      =  yinzping
HOMEDIR   =  /home/yinzping
JOB_ID    =  11036
JOB_NAME  =  LaAsPMfull
QUEUE     =  wp10
NSLOTS    =  36
NHOSTS    =  4

SUB_HOST  =  rupc06
SUB_DIR   =  /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping

EXE_HOST  =  n163
NFS_HOST  =  caip02s
EXE_DIR   =  /mnt/p05
OUT_DIR   =  /tmp
TMP_DIR   =  /tmp/11036.1.wp10

INFO      =  Files larger than 100MB will be compressed to reduce the network load.
INFO2     =  Do NOT remove this file while job is running!

PORT      =  21036
rcp: /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping/Gk_k: not a plain file
rcp: /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping/Vertex: not a plain file
rcp: /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping/ancont: not a plain file
rcp: /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping/dos: not a plain file
rcp: /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping/imp.0: not a plain file
Failure to rcp files!

Your job started at Thu Sep 1 19:28:55 EDT 2011 on host n163 in /mnt/p05/11036yinzping
Submission directory is /mnt/wk05/yinzping/WIEN2k/DMFT/FeAs/LaFeAsO/P4nmm/U5J8/beta160/Full2/2440yinzping/3826yinzping on host rupc06
-----------------------------------------------------------------------------------------
+ echo -catch_rsh /opt/sge6/spool/n163/active_jobs/11036.1/pe_hostfile /opt/mpich2/intel/11.1/
-catch_rsh /opt/sge6/spool/n163/active_jobs/11036.1/pe_hostfile /opt/mpich2/intel/11.1/
+ SLEEPTIME=5
+ RETRIES=10
+ catch_rsh=0
+ catch_hostname=0
+ '[' 3 -gt 0 ']'
+ case "$1" in
+ catch_rsh=1
+ shift
+ '[' 2 -gt 0 ']'
+ case "$1" in
+ break
++ basename /opt/sge6/mpich2_smpd/startmpich2.sh
+ me=startmpich2.sh
+ '[' 2 -lt 2 ']'
+ pe_hostfile=/opt/sge6/spool/n163/active_jobs/11036.1/pe_hostfile
+ MPICH2_ROOT=/opt/mpich2/intel/11.1/
+ export MPICH2_ROOT
+ '[' '!' -x /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 ']'
+ '[' '!' -x /opt/mpich2/intel/11.1//bin/smpd ']'
+ '[' '!' -r /opt/sge6/spool/n163/active_jobs/11036.1/pe_hostfile ']'
+ machines=/tmp/11036.1.wp10/machines
+ PeHostfile2MachineFile /opt/sge6/spool/n163/active_jobs/11036.1/pe_hostfile
+ cat /opt/sge6/spool/n163/active_jobs/11036.1/pe_hostfile
+ read line
++ echo n163 4 wp10@n163 UNDEFINED
++ cut -f1 '-d '
++ cut -f1 -d.
+ host=n163
++ echo n163 4 wp10@n163 UNDEFINED
++ cut -f2 '-d '
+ nslots=4
+ i=1
+ '[' 1 -le 4 ']'
+ echo n163
++ expr 1 + 1
+ i=2
+ '[' 2 -le 4 ']'
+ echo n163
++ expr 2 + 1
+ i=3
+ '[' 3 -le 4 ']'
+ echo n163
++ expr 3 + 1
+ i=4
+ '[' 4 -le 4 ']'
+ echo n163
++ expr 4 + 1
+ i=5
+ '[' 5 -le 4 ']'
+ read line
++ echo n146 12 wp10@n146 UNDEFINED
++ cut -f1 '-d '
++ cut -f1 -d.
+ host=n146
++ echo n146 12 wp10@n146 UNDEFINED
++ cut -f2 '-d '
+ nslots=12
+ i=1
+ '[' 1 -le 12 ']'
+ echo n146
++ expr 1 + 1
+ i=2
+ '[' 2 -le 12 ']'
+ echo n146
++ expr 2 + 1
+ i=3
+ '[' 3 -le 12 ']'
+ echo n146
++ expr 3 + 1
+ i=4
+ '[' 4 -le 12 ']'
+ echo n146
++ expr 4 + 1
+ i=5
+ '[' 5 -le 12 ']'
+ echo n146
++ expr 5 + 1
+ i=6
+ '[' 6 -le 12 ']'
+ echo n146
++ expr 6 + 1
+ i=7
+ '[' 7 -le 12 ']'
+ echo n146
++ expr 7 + 1
+ i=8
+ '[' 8 -le 12 ']'
+ echo n146
++ expr 8 + 1
+ i=9
+ '[' 9 -le 12 ']'
+ echo n146
++ expr 9 + 1
+ i=10
+ '[' 10 -le 12 ']'
+ echo n146
++ expr 10 + 1
+ i=11
+ '[' 11 -le 12 ']'
+ echo n146
++ expr 11 + 1
+ i=12
+ '[' 12 -le 12 ']'
+ echo n146
++ expr 12 + 1
+ i=13
+ '[' 13 -le 12 ']'
+ read line
++ echo n144 12 wp10@n144 UNDEFINED
++ cut -f1 '-d '
++ cut -f1 -d.
+ host=n144
++ echo n144 12 wp10@n144 UNDEFINED
++ cut -f2 '-d '
+ nslots=12
+ i=1
+ '[' 1 -le 12 ']'
+ echo n144
++ expr 1 + 1
+ i=2
+ '[' 2 -le 12 ']'
+ echo n144
++ expr 2 + 1
+ i=3
+ '[' 3 -le 12 ']'
+ echo n144
++ expr 3 + 1
+ i=4
+ '[' 4 -le 12 ']'
+ echo n144
++ expr 4 + 1
+ i=5
+ '[' 5 -le 12 ']'
+ echo n144
++ expr 5 + 1
+ i=6
+ '[' 6 -le 12 ']'
+ echo n144
++ expr 6 + 1
+ i=7
+ '[' 7 -le 12 ']'
+ echo n144
++ expr 7 + 1
+ i=8
+ '[' 8 -le 12 ']'
+ echo n144
++ expr 8 + 1
+ i=9
+ '[' 9 -le 12 ']'
+ echo n144
++ expr 9 + 1
+ i=10
+ '[' 10 -le 12 ']'
+ echo n144
++ expr 10 + 1
+ i=11
+ '[' 11 -le 12 ']'
+ echo n144
++ expr 11 + 1
+ i=12
+ '[' 12 -le 12 ']'
+ echo n144
++ expr 12 + 1
+ i=13
+ '[' 13 -le 12 ']'
+ read line
++ echo n147 8 wp10@n147 UNDEFINED
++ cut -f1 '-d '
++ cut -f1 -d.
+ host=n147
++ echo n147 8 wp10@n147 UNDEFINED
++ cut -f2 '-d '
+ nslots=8
+ i=1
+ '[' 1 -le 8 ']'
+ echo n147
++ expr 1 + 1
+ i=2
+ '[' 2 -le 8 ']'
+ echo n147
++ expr 2 + 1
+ i=3
+ '[' 3 -le 8 ']'
+ echo n147
++ expr 3 + 1
+ i=4
+ '[' 4 -le 8 ']'
+ echo n147
++ expr 4 + 1
+ i=5
+ '[' 5 -le 8 ']'
+ echo n147
++ expr 5 + 1
+ i=6
+ '[' 6 -le 8 ']'
+ echo n147
++ expr 6 + 1
+ i=7
+ '[' 7 -le 8 ']'
+ echo n147
++ expr 7 + 1
+ i=8
+ '[' 8 -le 8 ']'
+ echo n147
++ expr 8 + 1
+ i=9
+ '[' 9 -le 8 ']'
+ read line
+ cat /tmp/11036.1.wp10/machines
n163
n163
n163
n163
n146
n146
n146
n146
n146
n146
n146
n146
n146
n146
n146
n146
n144
n144
n144
n144
n144
n144
n144
n144
n144
n144
n144
n144
n147
n147
n147
n147
n147
n147
n147
n147
+ '[' 1 = 1 ']'
+ rsh_wrapper=/opt/sge6/mpich2_smpd/rsh
+ '[' '!' -x /opt/sge6/mpich2_smpd/rsh ']'
+ rshcmd=rsh
+ case "$ARC" in
+ ln -s /opt/sge6/mpich2_smpd/rsh /tmp/11036.1.wp10/rsh
+ hash -r
+ '[' 0 = 1 ']'
+ port=21036
++ cat /tmp/11036.1.wp10/machines
++ uniq
+ for host in '`cat $machines | uniq`'
+ /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 -n n163 /opt/mpich2/intel/11.1//bin/smpd 21036
+ for host in '`cat $machines | uniq`'
+ /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 -n n146 /opt/mpich2/intel/11.1//bin/smpd 21036
+ for host in '`cat $machines | uniq`'
+ /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 -n n144 /opt/mpich2/intel/11.1//bin/smpd 21036
+ for host in '`cat $machines | uniq`'
+ /opt/sge6/mpich2_smpd/bin/lx26-amd64/start_mpich2 -n n147 /opt/mpich2/intel/11.1//bin/smpd 21036
+ actual_retry=1
+ '[' 1 -le 10 ']'
+ echo 'startmpich2.sh: check for smpd daemons (1 of 10)'
startmpich2.sh: check for smpd daemons (1 of 10)
+ numhosts=0
++ cat /tmp/11036.1.wp10/machines
rsh n163 /opt/mpich2/intel/11.1//bin/smpd -port 21036 -d 0
++ uniq
+ for host in '`cat $machines | uniq`'
rsh n146 /opt/mpich2/intel/11.1//bin/smpd -port 21036 -d 0
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n163
++ head -n 1
++ cut -f 1 -d ' '
rsh n147 /opt/mpich2/intel/11.1//bin/smpd -port 21036 -d 0
Assertion failed in file smpd_sock_wait.i at line 337: pollinfo->state == SMPDU_SOCKI_STATE_DISCONNECTED && pollfd->fd == -1
internal ABORT - process 0
+ '[' '' == smpd ']'
+ echo 'startmpich2.sh: missing smpd on n163'
startmpich2.sh: missing smpd on n163
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n146
++ head -n 1
++ cut -f 1 -d ' '
Assertion failed in file smpd_sock_wait.i at line 337: pollinfo->state == SMPDU_SOCKI_STATE_DISCONNECTED && pollfd->fd == -1
internal ABORT - process 0
+ '[' '' == smpd ']'
+ echo 'startmpich2.sh: missing smpd on n146'
startmpich2.sh: missing smpd on n146
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n144
++ head -n 1
++ cut -f 1 -d ' '
Assertion failed in file smpd_sock_wait.i at line 337: pollinfo->state == SMPDU_SOCKI_STATE_DISCONNECTED && pollfd->fd == -1
internal ABORT - process 0
+ '[' '' == smpd ']'
+ echo 'startmpich2.sh: missing smpd on n144'
startmpich2.sh: missing smpd on n144
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n147
++ head -n 1
++ cut -f 1 -d ' '
Assertion failed in file smpd_sock_wait.i at line 337: pollinfo->state == SMPDU_SOCKI_STATE_DISCONNECTED && pollfd->fd == -1
internal ABORT - process 0
+ '[' '' == smpd ']'
+ echo 'startmpich2.sh: missing smpd on n147'
startmpich2.sh: missing smpd on n147
+ '[' 4 -eq 0 ']'
+ sleep 5
rsh n144 /opt/mpich2/intel/11.1//bin/smpd -port 21036 -d 0
+ (( actual_retry += 1 ))
+ '[' 2 -le 10 ']'
+ echo 'startmpich2.sh: check for smpd daemons (2 of 10)'
startmpich2.sh: check for smpd daemons (2 of 10)
+ numhosts=0
++ cat /tmp/11036.1.wp10/machines
++ uniq
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n163
++ head -n 1
++ cut -f 1 -d ' '
+ '[' smpd == smpd ']'
+ (( numhosts += 1 ))
+ echo 'startmpich2.sh: found running smpd on n163'
startmpich2.sh: found running smpd on n163
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n146
++ head -n 1
++ cut -f 1 -d ' '
+ '[' smpd == smpd ']'
+ (( numhosts += 1 ))
+ echo 'startmpich2.sh: found running smpd on n146'
startmpich2.sh: found running smpd on n146
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n144
++ head -n 1
++ cut -f 1 -d ' '
+ '[' smpd == smpd ']'
+ (( numhosts += 1 ))
+ echo 'startmpich2.sh: found running smpd on n144'
startmpich2.sh: found running smpd on n144
+ for host in '`cat $machines | uniq`'
++ /opt/mpich2/intel/11.1//bin/smpd -port 21036 -status n147
++ head -n 1
++ cut -f 1 -d ' '
+ '[' smpd == smpd ']'
+ (( numhosts += 1 ))
+ echo 'startmpich2.sh: found running smpd on n147'
startmpich2.sh: found running smpd on n147
+ '[' 4 -eq 4 ']'
+ echo 'startmpich2.sh: got all 4 of 4 nodes'
startmpich2.sh: got all 4 of 4 nodes
+ exit 0
rm: cannot remove `./*.broyd*': No such file or directory
-catch_rsh /opt/mpich2/intel/11.1/
Your job finished at Wed Sep 14 19:43:52 EDT 2011